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Protein sequencing
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1	Technical Note: illumina® sequencing ChIP-Seq Data Analysis ChIP-Seq is a powerful method to identify genome-wide DNA binding sites for a protein of interest. This technical note describes a simple approach to building Add to Reading List Source URL: dnatech.genomecenter.ucdavis.edu Language: English - Date: 2013-06-05 20:36:59
2	FOLLOWING THE CODE With the advent of genome sequencing technologies, researchers began combing genomes for open reading frames (ORFs). To enrich for genuine protein-coding ORFs and to eliminate those random sequences th Add to Reading List Source URL: www.the-scientist.com - Date: 2016-05-24 13:01:30
3	Published online 5 AprilNucleic Acids Research, 2011, Vol. 39, No. 12 e78 doi:nar/gkr172 Transcriptional regulation via TF-modifying Add to Reading List Source URL: www-stat.wharton.upenn.edu Language: English - Date: 2016-07-26 14:44:27 Biology Gene expression Biochemistry Transcription factors DNA Signal transduction Systems biology Gene regulatory network Protein kinase TRANSFAC ChIP-sequencing ENCODE
4	Advances and challenges in Protein-RNA: recognition, regulation and prediction Yael Mandel-Gutfreund (Technion-Israel Institute of Technology, Haifa, Israel) Gabriele Varani (University of Washington, Seattle, WA , USA) Add to Reading List Source URL: www.birs.ca Language: English - Date: 2015-07-24 14:52:29 Biology Genetics RNA Gene expression Biotechnology DNA Molecular biology RNA-binding protein CLIP ChIP-sequencing Non-coding RNA RNA splicing
5	Article Conformation-Dependent Epitopes Recognized by Prion Protein Antibodies Probed Using Mutational Scanning and Deep Sequencing Add to Reading List Source URL: www.che.udel.edu Language: English - Date: 2015-09-14 13:15:44 Biology Medicine Immunology Immune system Amyloidosis Genetics Structural proteins Prion PRNP Antibody Epitope Transmissible spongiform encephalopathy
6	Sequence Classification For Protein Analysis Sepp Hochreiter and Klaus Obermayer Technische Universit¨at Berlin To analyze the sequential data obtained from genome sequencing (DNA and the translated protein sequences), Add to Reading List Source URL: www.bioinf.jku.at Language: English - Date: 2013-01-23 02:38:18 Artificial neural networks Computational neuroscience Bioinformatics Computational biology Sepp Hochreiter Protein structure Long short-term memory Sequence alignment Artificial intelligence Protein superfamily Protein domain Threading
7	Microsoft Word - BIT_abstract2011F.docx Add to Reading List Source URL: www.igb.uci.edu Language: English - Date: 2013-02-12 18:02:46 Gene expression DNA Molecular biology RNA Protein methods ChIP-sequencing Human genome Chromatin Epigenetics Regulation of gene expression RNA-Seq Transcriptional regulation
8	1 Integrity of starting material  When performing RNA-seq, it is necessary to assess the integrity of total RNA prior to mRNA or small RNA isolation using the RNA 6000 Nano Assay.  A RNA Integrity Number (RIN) of a Add to Reading List Source URL: cmgm.stanford.edu Language: English - Date: 2011-03-23 14:44:53 Molecular biology Protein methods Immunologic tests DNA Biotechnology DNA fragmentation Chromatin immunoprecipitation RNA-Seq Immunoprecipitation Chromatin Sequencing Small RNA
9	P0487 Rapid Full-Length Iso-Seq cDNA sequencing of Rice mRNA to Facilitate Annotation and Identify Splice-Site Variation Dario Copetti¹ ֿ◌ ², Jianwei Zhang¹, Seunghee Lee¹, Jayson Talag¹, David Kudrna¹, Yeisoo Add to Reading List Source URL: www.pacb.com Language: English - Date: 2015-11-09 02:59:00 Molecular biology RNA-Seq DNA sequencing Sequencing Complementary DNA CDNA library Pacific Biosciences Protein isoform Transcriptome De novo transcriptome assembly
10	Full-length Isoform Sequencing of the Human MCF-7 Cell Line using ® PacBio Long Reads Add to Reading List Source URL: www.pacb.com Language: English - Date: 2015-11-09 02:25:00 Molecular biology Gene expression Pacific Biosciences RNA Genomics Proteins RNA-Seq Protein isoform Human genome Alternative splicing

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